the Gingras Laboratory

The Lunenfeld-Tanenbaum Research Institute

 

People

Current lab members

photo: Anne-Claude Gingras

Anne-Claude Gingras

Principal investigator

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Pearl Sequeira

Research administration

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photo: Hala Abdouni

Hala Abdouni

Lab manager

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Bhavisha Khatri

Research technician

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photo: Zhen-Yuan Lin

Zhen-Yuan Lin

Research Technician

Projects:

  • Various collaborations on BioID and technology development projects.

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photo: Ji Young  Youn

Ji Young Youn

Postdoctoral fellow

Projects:

  • Neurodegenerative diseases associated with RNA binding proteins deregulation.
  • Using proximity biotinylation and biochemical and genetic analysis to understand the organization and dynamic regulation of stress granules and p-bodies.

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photo: Payman Samavarchi Tehrani

Payman Samavarchi Tehrani

Postdoctoral fellow

Projects:

  • Development and optimization of lentiviral-based strategies for proximity biotinylation studies.
  • Characterizing transcription factor regulatory networks.

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photo: Geoffrey Hesketh

Geoffrey Hesketh

Postdoctoral fellow

Projects:

  • Parkinson's disease interactome mapping.
  • mTOR signaling on endocytic organelles.
  • Characterizing the endosomal trafficking machinery.

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photo: Stefan Maier

Stefan Maier

Postdoctoral fellow

Projects:

  • Optimization of multiplexing approaches for increasing MS throughput.

   

photo: Shen Zhang

Shen Zhang

Postdoctoral fellow

Projects:

  • Revealing the DPP4 proteome: Discovery of novel substrates using N-terminal proteomics.
  • Improve the analysis of protein interaction complexes by advanced mass spectrometry workflows.

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Irene Trinh

Postdoctoral fellow

Projects:

  • Modulation of interactions by rare disease variants.
  • Co-supervised by Mikko Taipale.

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photo: Chris Go

Chris Go

Graduate Student

Projects:

  • Proximity-based definition of the organization of a human cell.

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photo: Jonathan Roth

Jonathan Roth

Graduate Student

Projects:

  • Alternative Splicing Interaction Networks.
  • Co-supervised by Benjamin Blencowe.

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photo: Boris Dyakov

Boris Dyakov

Graduate Student

Projects:

  • Defining the organization of proteins within the nucleus.

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photo: Benjamin Piette

Benjamin Piette

Graduate Student

Projects:

  • DNAJ and HSP70 interactomes characterization.
  • Co-supervised by Mikko Taipale.

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photo: Reuben Samson

Reuben Samson

Graduate Student

Projects:

  • Understanding changes in structural organization during somatic cell reprogramming.

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Kento Abe

Graduate Student

Projects:

  • STRIPAK roles in the Hippo pathway and in Cerebral Cavernous Malformations.

   

Shimon Rosenthal

Graduate student

Projects:

  • Cerebral cavernous malformations in zebrafish.
  • Co-supervised by Ian Scott.

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Francesco Zangari

Graduate student

Projects:

  • Functional and physical characterization of new components of the CCR4-NOT deadenylase module.

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Julia Kitaygorodsky

Graduate student

Projects:

  • Crosslinking for structural biology.

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photo: James Knight

James Knight

Bioinformatics lead

Projects:

  • Computational analysis of proximity biotinylation data and development of the cell-map.org resource..
  • Development and maintenance of ProHits-viz, a set of analysis and visualization resources for interaction proteomics.

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photo: Frank Liu

Frank Liu

Programmer

Projects:

  • Development and maintenance of the ProHits-LIMS, a laboratory information management system for proteomics.

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photo: JianPing Zhang

JianPing Zhang

Programmer

Projects:

  • Development and maintenance of ProHits-web, a repository for interaction data.

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photo: Brett Larsen

Brett Larsen

Mass spectrometry coordinator

Projects:

  • Development of methods for mass spectrometric analysis.
  • Consultation on technically-challenging projects and collaborations.

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photo: Cassandra Wong

Cassandra Wong

Mass spectrometry technician

Projects:

  • Various collaborations on BioID and technology development projects.
  • Characterization of cancer interactomes.

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Karen Colwill

Manager, NBCC

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  people
Current lab members
Past members

 

 

 

people
Anne-Claude Gingras
Pearl Sequeira
Hala Abdouni
Bhavisha Khatri
Zhen-Yuan Lin
Ji Young Youn
Payman Samavarchi Tehrani
Geoffrey Hesketh
Stefan Maier
Shen Zhang
Irene Trinh
Chris Go
Jonathan Roth
Boris Dyakov
Benjamin Piette
Reuben Samson
Kento Abe
Shimon Rosenthal
Francesco Zangari
Julia Kitaygorodsky
James Knight
Frank Liu
JianPing Zhang
Brett Larsen
Cassandra Wong
Karen Colwill

 

 

 

 
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